MoDEL is a large library of molecular dynamics trajectories of representative protein structures,
prepared with the state-of-the-art technology
MoDEL. Molecular Dynamics Extended Library. v 2.0beta
More than 1,700 trajectories of proteins representative of all monomeric soluble structures in PDB have been studied by means of state-of-the-art atomistic molecular dynamics simulations in near-physiological conditions. Trajectories and analysis performed on them are stored in a large data warehouse, which can be queried for dynamic information on proteins, including interactions. This web site is the main entry point to the library,showing the simulated structures basic, pre-made, analysis on them. The web site is in constant update, not only on the simulations available, but also on the analysis and tools included.
