Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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T |
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C |
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G |
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G |
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C |
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G |
- |
C |
- |
C |
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A |
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T |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
A |
- |
G |
- |
C |
- |
C |
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G |
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C |
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G |
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G |
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T |
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A |
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G |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 2.087 | 0.655 |
| Mean | Stdev |
1_N3-24_H1-1 | 2.020 | 0.492 |
| Mean | Stdev |
1_O2-24_H21-1 | 1.978 | 0.453 |
| Mean | Stdev |
10_H61-15_O4-10 | 1.992 | 0.177 |
| Mean | Stdev |
10_N1-15_H3-10 | 1.984 | 0.123 |
| Mean | Stdev |
11_H3-14_N1-11 | 1.993 | 0.131 |
| Mean | Stdev |
11_O4-14_H61-11 | 2.011 | 0.189 |
| Mean | Stdev |
12_H41-13_O6-12 | 2.040 | 0.399 |
| Mean | Stdev |
12_N3-13_H1-12 | 2.017 | 0.279 |
| Mean | Stdev |
12_O2-13_H21-12 | 1.925 | 0.302 |
| Mean | Stdev |
2_H3-23_N1-2 | 1.970 | 0.119 |
| Mean | Stdev |
2_O4-23_H61-2 | 1.994 | 0.195 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.972 | 0.173 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.972 | 0.096 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.884 | 0.122 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.960 | 0.093 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.886 | 0.123 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.954 | 0.160 |
| Mean | Stdev |
5_H1-20_N3-5 | 1.969 | 0.093 |
| Mean | Stdev |
5_H21-20_O2-5 | 1.905 | 0.126 |
| Mean | Stdev |
5_O6-20_H41-5 | 1.964 | 0.161 |
| Mean | Stdev |
6_H41-19_O6-6 | 1.964 | 0.164 |
| Mean | Stdev |
6_N3-19_H1-6 | 1.966 | 0.090 |
| Mean | Stdev |
6_O2-19_H21-6 | 1.891 | 0.122 |
| Mean | Stdev |
7_H1-18_N3-7 | 1.965 | 0.093 |
| Mean | Stdev |
7_H21-18_O2-7 | 1.889 | 0.123 |
| Mean | Stdev |
7_O6-18_H41-7 | 1.957 | 0.160 |
| Mean | Stdev |
8_H41-17_O6-8 | 1.971 | 0.161 |
| Mean | Stdev |
8_N3-17_H1-8 | 1.977 | 0.096 |
| Mean | Stdev |
8_O2-17_H21-8 | 1.914 | 0.133 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.967 | 0.161 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.962 | 0.092 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.865 | 0.113 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 2.0870 | 0.6551 |
1 | N3-H1_1-24 | 2.0201 | 0.4922 |
1 | O2-H21_1-24 | 1.9785 | 0.4526 |
2 | H3-N1_2-23 | 1.9700 | 0.1194 |
2 | O4-H61_2-23 | 1.9935 | 0.1949 |
3 | H41-O6_3-22 | 1.9718 | 0.1732 |
3 | N3-H1_3-22 | 1.9721 | 0.0962 |
3 | O2-H21_3-22 | 1.8837 | 0.1219 |
4 | O6-H41_4-21 | 1.9540 | 0.1601 |
4 | H1-N3_4-21 | 1.9604 | 0.0932 |
4 | H21-O2_4-21 | 1.8857 | 0.1232 |
5 | O6-H41_5-20 | 1.9635 | 0.1612 |
5 | H1-N3_5-20 | 1.9686 | 0.0930 |
5 | H21-O2_5-20 | 1.9054 | 0.1264 |
6 | H41-O6_6-19 | 1.9641 | 0.1643 |
6 | N3-H1_6-19 | 1.9663 | 0.0902 |
6 | O2-H21_6-19 | 1.8907 | 0.1217 |
7 | O6-H41_7-18 | 1.9566 | 0.1597 |
7 | H1-N3_7-18 | 1.9652 | 0.0929 |
7 | H21-O2_7-18 | 1.8892 | 0.1233 |
8 | H41-O6_8-17 | 1.9706 | 0.1614 |
8 | N3-H1_8-17 | 1.9773 | 0.0960 |
8 | O2-H21_8-17 | 1.9143 | 0.1326 |
9 | H41-O6_9-16 | 1.9668 | 0.1611 |
9 | N3-H1_9-16 | 1.9617 | 0.0917 |
9 | O2-H21_9-16 | 1.8653 | 0.1125 |
10 | N1-H3_10-15 | 1.9842 | 0.1232 |
10 | H61-O4_10-15 | 1.9921 | 0.1768 |
11 | H3-N1_11-14 | 1.9930 | 0.1308 |
11 | O4-H61_11-14 | 2.0106 | 0.1888 |
12 | H41-O6_12-13 | 2.0402 | 0.3990 |
12 | N3-H1_12-13 | 2.0173 | 0.2789 |
12 | O2-H21_12-13 | 1.9255 | 0.3018 |