Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
11 |
|
12 |
|
13 |
|
14 |
|
15 |
|
16 |
|
5' |
C |
- |
G |
- |
T |
- |
C |
- |
T |
- |
C |
- |
C |
- |
T |
- |
A |
- |
G |
- |
G |
- |
G |
- |
A |
- |
G |
- |
G |
- |
C |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
G |
- |
C |
- |
A |
- |
G |
- |
A |
- |
G |
- |
G |
- |
A |
- |
T |
- |
C |
- |
C |
- |
C |
- |
T |
- |
C |
- |
C |
- |
G |
5' |
|
32 |
|
31 |
|
30 |
|
29 |
|
28 |
|
27 |
|
26 |
|
25 |
|
24 |
|
23 |
|
22 |
|
21 |
|
20 |
|
19 |
|
18 |
|
17 |
|
Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 3.048 | 2.307 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.985 | 2.289 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.954 | 2.398 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.965 | 0.092 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.892 | 0.122 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.975 | 0.164 |
| Mean | Stdev |
11_H1-22_N3-11 | 1.962 | 0.093 |
| Mean | Stdev |
11_H21-22_O2-11 | 1.904 | 0.130 |
| Mean | Stdev |
11_O6-22_H41-11 | 1.951 | 0.159 |
| Mean | Stdev |
12_H1-21_N3-12 | 1.976 | 0.097 |
| Mean | Stdev |
12_H21-21_O2-12 | 1.906 | 0.127 |
| Mean | Stdev |
12_O6-21_H41-12 | 1.960 | 0.159 |
| Mean | Stdev |
13_H61-20_O4-13 | 1.990 | 0.193 |
| Mean | Stdev |
13_N1-20_H3-13 | 1.974 | 0.119 |
| Mean | Stdev |
14_H1-19_N3-14 | 1.952 | 0.090 |
| Mean | Stdev |
14_H21-19_O2-14 | 1.887 | 0.123 |
| Mean | Stdev |
14_O6-19_H41-14 | 1.970 | 0.164 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.965 | 0.095 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.898 | 0.125 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.957 | 0.157 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.999 | 0.233 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.001 | 0.118 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.914 | 0.142 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.972 | 0.101 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.887 | 0.125 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.980 | 0.171 |
| Mean | Stdev |
3_H3-30_N1-3 | 2.014 | 0.139 |
| Mean | Stdev |
3_O4-30_H61-3 | 1.956 | 0.164 |
| Mean | Stdev |
4_H41-29_O6-4 | 1.968 | 0.155 |
| Mean | Stdev |
4_N3-29_H1-4 | 1.963 | 0.092 |
| Mean | Stdev |
4_O2-29_H21-4 | 1.912 | 0.135 |
| Mean | Stdev |
5_H3-28_N1-5 | 1.979 | 0.124 |
| Mean | Stdev |
5_O4-28_H61-5 | 1.985 | 0.183 |
| Mean | Stdev |
6_H41-27_O6-6 | 1.952 | 0.149 |
| Mean | Stdev |
6_N3-27_H1-6 | 1.966 | 0.092 |
| Mean | Stdev |
6_O2-27_H21-6 | 1.906 | 0.127 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.973 | 0.161 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.968 | 0.093 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.902 | 0.128 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.965 | 0.116 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.027 | 0.215 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.012 | 0.207 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.977 | 0.129 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 3.0480 | 2.3071 |
1 | N3-H1_1-32 | 2.9852 | 2.2893 |
1 | O2-H21_1-32 | 2.9535 | 2.3984 |
2 | O6-H41_2-31 | 1.9800 | 0.1712 |
2 | H1-N3_2-31 | 1.9720 | 0.1008 |
2 | H21-O2_2-31 | 1.8873 | 0.1248 |
3 | H3-N1_3-30 | 2.0135 | 0.1394 |
3 | O4-H61_3-30 | 1.9559 | 0.1641 |
4 | H41-O6_4-29 | 1.9677 | 0.1549 |
4 | N3-H1_4-29 | 1.9629 | 0.0918 |
4 | O2-H21_4-29 | 1.9123 | 0.1348 |
5 | H3-N1_5-28 | 1.9791 | 0.1242 |
5 | O4-H61_5-28 | 1.9851 | 0.1827 |
6 | H41-O6_6-27 | 1.9520 | 0.1490 |
6 | N3-H1_6-27 | 1.9660 | 0.0917 |
6 | O2-H21_6-27 | 1.9060 | 0.1270 |
7 | H41-O6_7-26 | 1.9730 | 0.1609 |
7 | N3-H1_7-26 | 1.9681 | 0.0930 |
7 | O2-H21_7-26 | 1.9022 | 0.1276 |
8 | H3-N1_8-25 | 1.9651 | 0.1163 |
8 | O4-H61_8-25 | 2.0274 | 0.2147 |
9 | N1-H3_9-24 | 1.9766 | 0.1287 |
9 | H61-O4_9-24 | 2.0122 | 0.2071 |
10 | O6-H41_10-23 | 1.9748 | 0.1638 |
10 | H1-N3_10-23 | 1.9648 | 0.0918 |
10 | H21-O2_10-23 | 1.8919 | 0.1221 |
11 | O6-H41_11-22 | 1.9506 | 0.1591 |
11 | H1-N3_11-22 | 1.9619 | 0.0926 |
11 | H21-O2_11-22 | 1.9043 | 0.1301 |
12 | O6-H41_12-21 | 1.9600 | 0.1585 |
12 | H1-N3_12-21 | 1.9761 | 0.0968 |
12 | H21-O2_12-21 | 1.9056 | 0.1274 |
13 | N1-H3_13-20 | 1.9744 | 0.1186 |
13 | H61-O4_13-20 | 1.9901 | 0.1929 |
14 | O6-H41_14-19 | 1.9697 | 0.1640 |
14 | H1-N3_14-19 | 1.9523 | 0.0897 |
14 | H21-O2_14-19 | 1.8875 | 0.1229 |
15 | O6-H41_15-18 | 1.9567 | 0.1574 |
15 | H1-N3_15-18 | 1.9654 | 0.0946 |
15 | H21-O2_15-18 | 1.8983 | 0.1252 |
16 | H41-O6_16-17 | 1.9994 | 0.2334 |
16 | N3-H1_16-17 | 2.0005 | 0.1185 |
16 | O2-H21_16-17 | 1.9138 | 0.1421 |