Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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G |
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A |
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G |
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C |
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C |
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T |
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A |
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G |
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A |
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C |
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T |
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C |
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G |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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C |
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C |
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T |
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C |
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G |
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G |
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A |
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T |
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C |
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T |
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G |
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A |
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G |
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C |
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G |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 3.541 | 2.813 |
| Mean | Stdev |
1_N3-32_H1-1 | 3.476 | 2.774 |
| Mean | Stdev |
1_O2-32_H21-1 | 3.463 | 2.894 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.964 | 0.093 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.912 | 0.131 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.980 | 0.161 |
| Mean | Stdev |
11_H61-22_O4-11 | 1.986 | 0.191 |
| Mean | Stdev |
11_N1-22_H3-11 | 1.987 | 0.128 |
| Mean | Stdev |
12_H41-21_O6-12 | 2.005 | 0.179 |
| Mean | Stdev |
12_N3-21_H1-12 | 1.961 | 0.095 |
| Mean | Stdev |
12_O2-21_H21-12 | 1.888 | 0.122 |
| Mean | Stdev |
13_H3-20_N1-13 | 1.973 | 0.119 |
| Mean | Stdev |
13_O4-20_H61-13 | 1.999 | 0.185 |
| Mean | Stdev |
14_H41-19_O6-14 | 1.964 | 0.159 |
| Mean | Stdev |
14_N3-19_H1-14 | 1.963 | 0.092 |
| Mean | Stdev |
14_O2-19_H21-14 | 1.889 | 0.121 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.971 | 0.092 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.895 | 0.123 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.948 | 0.147 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.976 | 0.184 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.002 | 0.111 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.924 | 0.149 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.972 | 0.145 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.896 | 0.152 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.977 | 0.288 |
| Mean | Stdev |
3_H1-30_N3-3 | 1.976 | 0.095 |
| Mean | Stdev |
3_H21-30_O2-3 | 1.912 | 0.134 |
| Mean | Stdev |
3_O6-30_H41-3 | 1.966 | 0.164 |
| Mean | Stdev |
4_H61-29_O4-4 | 2.004 | 0.193 |
| Mean | Stdev |
4_N1-29_H3-4 | 1.962 | 0.114 |
| Mean | Stdev |
5_H1-28_N3-5 | 1.961 | 0.092 |
| Mean | Stdev |
5_H21-28_O2-5 | 1.902 | 0.126 |
| Mean | Stdev |
5_O6-28_H41-5 | 1.974 | 0.165 |
| Mean | Stdev |
6_H41-27_O6-6 | 1.957 | 0.161 |
| Mean | Stdev |
6_N3-27_H1-6 | 1.958 | 0.090 |
| Mean | Stdev |
6_O2-27_H21-6 | 1.910 | 0.130 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.998 | 0.170 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.968 | 0.092 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.896 | 0.126 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.965 | 0.117 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.042 | 0.224 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.001 | 0.200 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.983 | 0.132 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 3.5407 | 2.8134 |
1 | N3-H1_1-32 | 3.4760 | 2.7736 |
1 | O2-H21_1-32 | 3.4627 | 2.8945 |
2 | O6-H41_2-31 | 1.9774 | 0.2878 |
2 | H1-N3_2-31 | 1.9725 | 0.1448 |
2 | H21-O2_2-31 | 1.8959 | 0.1517 |
3 | O6-H41_3-30 | 1.9656 | 0.1637 |
3 | H1-N3_3-30 | 1.9761 | 0.0954 |
3 | H21-O2_3-30 | 1.9123 | 0.1338 |
4 | N1-H3_4-29 | 1.9624 | 0.1137 |
4 | H61-O4_4-29 | 2.0036 | 0.1929 |
5 | O6-H41_5-28 | 1.9740 | 0.1645 |
5 | H1-N3_5-28 | 1.9607 | 0.0916 |
5 | H21-O2_5-28 | 1.9024 | 0.1263 |
6 | H41-O6_6-27 | 1.9569 | 0.1610 |
6 | N3-H1_6-27 | 1.9581 | 0.0900 |
6 | O2-H21_6-27 | 1.9100 | 0.1296 |
7 | H41-O6_7-26 | 1.9975 | 0.1700 |
7 | N3-H1_7-26 | 1.9679 | 0.0917 |
7 | O2-H21_7-26 | 1.8963 | 0.1263 |
8 | H3-N1_8-25 | 1.9649 | 0.1166 |
8 | O4-H61_8-25 | 2.0421 | 0.2237 |
9 | N1-H3_9-24 | 1.9833 | 0.1317 |
9 | H61-O4_9-24 | 2.0005 | 0.2004 |
10 | O6-H41_10-23 | 1.9805 | 0.1611 |
10 | H1-N3_10-23 | 1.9645 | 0.0930 |
10 | H21-O2_10-23 | 1.9124 | 0.1309 |
11 | N1-H3_11-22 | 1.9872 | 0.1284 |
11 | H61-O4_11-22 | 1.9858 | 0.1911 |
12 | H41-O6_12-21 | 2.0050 | 0.1788 |
12 | N3-H1_12-21 | 1.9607 | 0.0948 |
12 | O2-H21_12-21 | 1.8880 | 0.1222 |
13 | H3-N1_13-20 | 1.9726 | 0.1189 |
13 | O4-H61_13-20 | 1.9992 | 0.1849 |
14 | H41-O6_14-19 | 1.9635 | 0.1593 |
14 | N3-H1_14-19 | 1.9632 | 0.0924 |
14 | O2-H21_14-19 | 1.8889 | 0.1215 |
15 | O6-H41_15-18 | 1.9483 | 0.1470 |
15 | H1-N3_15-18 | 1.9710 | 0.0917 |
15 | H21-O2_15-18 | 1.8955 | 0.1230 |
16 | H41-O6_16-17 | 1.9761 | 0.1839 |
16 | N3-H1_16-17 | 2.0017 | 0.1113 |
16 | O2-H21_16-17 | 1.9236 | 0.1488 |