Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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A |
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A |
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A |
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A |
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C |
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T |
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A |
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G |
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T |
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T |
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T |
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T |
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G |
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C |
3' |
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x |
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x |
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x |
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x |
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3' |
G |
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C |
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T |
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T |
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T |
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T |
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G |
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A |
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T |
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C |
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A |
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A |
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A |
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A |
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G |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.832 | 2.313 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.721 | 2.060 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.637 | 2.015 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.974 | 0.099 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.902 | 0.126 |
| Mean | Stdev |
10_O6-23_H41-10 | 2.014 | 0.182 |
| Mean | Stdev |
11_H3-22_N1-11 | 1.959 | 0.113 |
| Mean | Stdev |
11_O4-22_H61-11 | 2.002 | 0.190 |
| Mean | Stdev |
12_H3-21_N1-12 | 1.967 | 0.113 |
| Mean | Stdev |
12_O4-21_H61-12 | 1.992 | 0.175 |
| Mean | Stdev |
13_H3-20_N1-13 | 1.976 | 0.120 |
| Mean | Stdev |
13_O4-20_H61-13 | 1.990 | 0.168 |
| Mean | Stdev |
14_H3-19_N1-14 | 1.963 | 0.117 |
| Mean | Stdev |
14_O4-19_H61-14 | 1.999 | 0.188 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.978 | 0.093 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.897 | 0.123 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.963 | 0.155 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.989 | 0.259 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.005 | 0.184 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.934 | 0.222 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.971 | 0.131 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.891 | 0.129 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.971 | 0.258 |
| Mean | Stdev |
3_H61-30_O4-3 | 1.982 | 0.171 |
| Mean | Stdev |
3_N1-30_H3-3 | 1.990 | 0.126 |
| Mean | Stdev |
4_H61-29_O4-4 | 1.987 | 0.171 |
| Mean | Stdev |
4_N1-29_H3-4 | 1.969 | 0.117 |
| Mean | Stdev |
5_H61-28_O4-5 | 1.991 | 0.177 |
| Mean | Stdev |
5_N1-28_H3-5 | 1.971 | 0.117 |
| Mean | Stdev |
6_H61-27_O4-6 | 2.004 | 0.186 |
| Mean | Stdev |
6_N1-27_H3-6 | 1.955 | 0.113 |
| Mean | Stdev |
7_H41-26_O6-7 | 2.022 | 0.188 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.975 | 0.098 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.891 | 0.122 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.954 | 0.120 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.078 | 0.274 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.060 | 0.264 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.956 | 0.122 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.8322 | 2.3126 |
1 | N3-H1_1-32 | 2.7215 | 2.0603 |
1 | O2-H21_1-32 | 2.6373 | 2.0155 |
2 | O6-H41_2-31 | 1.9712 | 0.2580 |
2 | H1-N3_2-31 | 1.9706 | 0.1305 |
2 | H21-O2_2-31 | 1.8914 | 0.1292 |
3 | N1-H3_3-30 | 1.9895 | 0.1262 |
3 | H61-O4_3-30 | 1.9824 | 0.1710 |
4 | N1-H3_4-29 | 1.9692 | 0.1165 |
4 | H61-O4_4-29 | 1.9873 | 0.1707 |
5 | N1-H3_5-28 | 1.9710 | 0.1168 |
5 | H61-O4_5-28 | 1.9912 | 0.1767 |
6 | N1-H3_6-27 | 1.9549 | 0.1133 |
6 | H61-O4_6-27 | 2.0042 | 0.1858 |
7 | H41-O6_7-26 | 2.0223 | 0.1875 |
7 | N3-H1_7-26 | 1.9747 | 0.0980 |
7 | O2-H21_7-26 | 1.8914 | 0.1218 |
8 | H3-N1_8-25 | 1.9540 | 0.1198 |
8 | O4-H61_8-25 | 2.0781 | 0.2743 |
9 | N1-H3_9-24 | 1.9560 | 0.1225 |
9 | H61-O4_9-24 | 2.0599 | 0.2644 |
10 | O6-H41_10-23 | 2.0138 | 0.1823 |
10 | H1-N3_10-23 | 1.9737 | 0.0994 |
10 | H21-O2_10-23 | 1.9022 | 0.1258 |
11 | H3-N1_11-22 | 1.9586 | 0.1125 |
11 | O4-H61_11-22 | 2.0017 | 0.1896 |
12 | H3-N1_12-21 | 1.9669 | 0.1129 |
12 | O4-H61_12-21 | 1.9917 | 0.1754 |
13 | H3-N1_13-20 | 1.9758 | 0.1200 |
13 | O4-H61_13-20 | 1.9895 | 0.1682 |
14 | H3-N1_14-19 | 1.9629 | 0.1170 |
14 | O4-H61_14-19 | 1.9993 | 0.1879 |
15 | O6-H41_15-18 | 1.9628 | 0.1552 |
15 | H1-N3_15-18 | 1.9784 | 0.0932 |
15 | H21-O2_15-18 | 1.8969 | 0.1230 |
16 | H41-O6_16-17 | 1.9887 | 0.2589 |
16 | N3-H1_16-17 | 2.0047 | 0.1842 |
16 | O2-H21_16-17 | 1.9342 | 0.2223 |