Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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17 |
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5' |
T |
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C |
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G |
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A |
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A |
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C |
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T |
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T |
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C |
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C |
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G |
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G |
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C |
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T |
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C |
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G |
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A |
3' |
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3' |
A |
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G |
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C |
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T |
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T |
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G |
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A |
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A |
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G |
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G |
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C |
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T |
5' |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H3-34_N1-1 | 3.485 | 1.700 |
| Mean | Stdev |
1_O4-34_H61-1 | 3.940 | 2.147 |
| Mean | Stdev |
10_H41-25_O6-10 | 1.951 | 0.149 |
| Mean | Stdev |
10_N3-25_H1-10 | 1.963 | 0.089 |
| Mean | Stdev |
10_O2-25_H21-10 | 1.891 | 0.122 |
| Mean | Stdev |
11_H1-24_N3-11 | 1.959 | 0.089 |
| Mean | Stdev |
11_H21-24_O2-11 | 1.872 | 0.115 |
| Mean | Stdev |
11_O6-24_H41-11 | 1.967 | 0.162 |
| Mean | Stdev |
12_H1-23_N3-12 | 1.966 | 0.091 |
| Mean | Stdev |
12_H21-23_O2-12 | 1.920 | 0.134 |
| Mean | Stdev |
12_O6-23_H41-12 | 1.960 | 0.159 |
| Mean | Stdev |
13_H41-22_O6-13 | 1.969 | 0.167 |
| Mean | Stdev |
13_N3-22_H1-13 | 1.954 | 0.089 |
| Mean | Stdev |
13_O2-22_H21-13 | 1.897 | 0.124 |
| Mean | Stdev |
14_H3-21_N1-14 | 1.980 | 0.121 |
| Mean | Stdev |
14_O4-21_H61-14 | 1.976 | 0.182 |
| Mean | Stdev |
15_H41-20_O6-15 | 1.963 | 0.161 |
| Mean | Stdev |
15_N3-20_H1-15 | 1.971 | 0.094 |
| Mean | Stdev |
15_O2-20_H21-15 | 1.888 | 0.123 |
| Mean | Stdev |
16_H1-19_N3-16 | 1.970 | 0.104 |
| Mean | Stdev |
16_H21-19_O2-16 | 1.891 | 0.127 |
| Mean | Stdev |
16_O6-19_H41-16 | 1.971 | 0.188 |
| Mean | Stdev |
17_H61-18_O4-17 | 4.319 | 2.320 |
| Mean | Stdev |
17_N1-18_H3-17 | 3.772 | 1.935 |
| Mean | Stdev |
2_H41-33_O6-2 | 1.981 | 0.270 |
| Mean | Stdev |
2_N3-33_H1-2 | 1.975 | 0.138 |
| Mean | Stdev |
2_O2-33_H21-2 | 1.893 | 0.134 |
| Mean | Stdev |
3_H1-32_N3-3 | 1.971 | 0.095 |
| Mean | Stdev |
3_H21-32_O2-3 | 1.886 | 0.125 |
| Mean | Stdev |
3_O6-32_H41-3 | 1.961 | 0.159 |
| Mean | Stdev |
4_H61-31_O4-4 | 1.981 | 0.172 |
| Mean | Stdev |
4_N1-31_H3-4 | 1.983 | 0.120 |
| Mean | Stdev |
5_H61-30_O4-5 | 1.994 | 0.176 |
| Mean | Stdev |
5_N1-30_H3-5 | 1.955 | 0.111 |
| Mean | Stdev |
6_H41-29_O6-6 | 1.998 | 0.178 |
| Mean | Stdev |
6_N3-29_H1-6 | 1.965 | 0.098 |
| Mean | Stdev |
6_O2-29_H21-6 | 1.890 | 0.123 |
| Mean | Stdev |
7_H3-28_N1-7 | 1.941 | 0.107 |
| Mean | Stdev |
7_O4-28_H61-7 | 2.032 | 0.208 |
| Mean | Stdev |
8_H3-27_N1-8 | 1.969 | 0.115 |
| Mean | Stdev |
8_O4-27_H61-8 | 2.002 | 0.190 |
| Mean | Stdev |
9_H41-26_O6-9 | 1.959 | 0.166 |
| Mean | Stdev |
9_N3-26_H1-9 | 1.976 | 0.097 |
| Mean | Stdev |
9_O2-26_H21-9 | 1.919 | 0.135 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H3-N1_1-34 | 3.4853 | 1.7005 |
1 | O4-H61_1-34 | 3.9402 | 2.1473 |
2 | H41-O6_2-33 | 1.9813 | 0.2702 |
2 | N3-H1_2-33 | 1.9754 | 0.1381 |
2 | O2-H21_2-33 | 1.8935 | 0.1342 |
3 | O6-H41_3-32 | 1.9607 | 0.1594 |
3 | H1-N3_3-32 | 1.9706 | 0.0946 |
3 | H21-O2_3-32 | 1.8861 | 0.1253 |
4 | N1-H3_4-31 | 1.9828 | 0.1205 |
4 | H61-O4_4-31 | 1.9809 | 0.1715 |
5 | N1-H3_5-30 | 1.9551 | 0.1109 |
5 | H61-O4_5-30 | 1.9938 | 0.1762 |
6 | H41-O6_6-29 | 1.9979 | 0.1776 |
6 | N3-H1_6-29 | 1.9646 | 0.0977 |
6 | O2-H21_6-29 | 1.8897 | 0.1235 |
7 | H3-N1_7-28 | 1.9411 | 0.1068 |
7 | O4-H61_7-28 | 2.0316 | 0.2078 |
8 | H3-N1_8-27 | 1.9694 | 0.1146 |
8 | O4-H61_8-27 | 2.0018 | 0.1897 |
9 | H41-O6_9-26 | 1.9593 | 0.1656 |
9 | N3-H1_9-26 | 1.9756 | 0.0966 |
9 | O2-H21_9-26 | 1.9191 | 0.1349 |
10 | H41-O6_10-25 | 1.9509 | 0.1491 |
10 | N3-H1_10-25 | 1.9628 | 0.0891 |
10 | O2-H21_10-25 | 1.8911 | 0.1225 |
11 | O6-H41_11-24 | 1.9673 | 0.1620 |
11 | H1-N3_11-24 | 1.9592 | 0.0894 |
11 | H21-O2_11-24 | 1.8718 | 0.1149 |
12 | O6-H41_12-23 | 1.9597 | 0.1591 |
12 | H1-N3_12-23 | 1.9655 | 0.0908 |
12 | H21-O2_12-23 | 1.9204 | 0.1342 |
13 | H41-O6_13-22 | 1.9691 | 0.1669 |
13 | N3-H1_13-22 | 1.9539 | 0.0895 |
13 | O2-H21_13-22 | 1.8975 | 0.1243 |
14 | H3-N1_14-21 | 1.9805 | 0.1208 |
14 | O4-H61_14-21 | 1.9757 | 0.1818 |
15 | H41-O6_15-20 | 1.9633 | 0.1612 |
15 | N3-H1_15-20 | 1.9709 | 0.0944 |
15 | O2-H21_15-20 | 1.8880 | 0.1231 |
16 | O6-H41_16-19 | 1.9706 | 0.1879 |
16 | H1-N3_16-19 | 1.9704 | 0.1043 |
16 | H21-O2_16-19 | 1.8913 | 0.1274 |
17 | N1-H3_17-18 | 3.7725 | 1.9353 |
17 | H61-O4_17-18 | 4.3192 | 2.3195 |