Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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8 |
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11 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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A |
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A |
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C |
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G |
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T |
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G |
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C |
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G |
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G |
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A |
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G |
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C |
3' |
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3' |
C |
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G |
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T |
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T |
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A |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.041 | 0.334 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.956 | 0.321 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.071 | 0.719 |
| Mean | Stdev |
10_H3-27_N1-10 | 1.953 | 0.112 |
| Mean | Stdev |
10_O4-27_H61-10 | 2.033 | 0.219 |
| Mean | Stdev |
11_H61-26_O4-11 | 2.011 | 0.196 |
| Mean | Stdev |
11_N1-26_H3-11 | 1.996 | 0.128 |
| Mean | Stdev |
12_H3-25_N1-12 | 1.990 | 0.123 |
| Mean | Stdev |
12_O4-25_H61-12 | 1.996 | 0.180 |
| Mean | Stdev |
13_H1-24_N3-13 | 1.964 | 0.097 |
| Mean | Stdev |
13_H21-24_O2-13 | 1.877 | 0.119 |
| Mean | Stdev |
13_O6-24_H41-13 | 1.962 | 0.172 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.985 | 0.101 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.928 | 0.143 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.975 | 0.169 |
| Mean | Stdev |
15_H61-22_O4-15 | 2.011 | 0.206 |
| Mean | Stdev |
15_N1-22_H3-15 | 1.973 | 0.118 |
| Mean | Stdev |
16_H61-21_O4-16 | 2.030 | 0.206 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.947 | 0.109 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.968 | 0.095 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.894 | 0.124 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.979 | 0.166 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.009 | 0.230 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.002 | 0.120 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.916 | 0.144 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.969 | 0.156 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.981 | 0.096 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.899 | 0.125 |
| Mean | Stdev |
3_H61-34_O4-3 | 1.987 | 0.170 |
| Mean | Stdev |
3_N1-34_H3-3 | 1.962 | 0.112 |
| Mean | Stdev |
4_H61-33_O4-4 | 1.982 | 0.172 |
| Mean | Stdev |
4_N1-33_H3-4 | 1.976 | 0.119 |
| Mean | Stdev |
5_H41-32_O6-5 | 1.996 | 0.222 |
| Mean | Stdev |
5_N3-32_H1-5 | 1.968 | 0.117 |
| Mean | Stdev |
5_O2-32_H21-5 | 1.890 | 0.124 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.983 | 0.105 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.878 | 0.116 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.983 | 0.183 |
| Mean | Stdev |
7_H3-30_N1-7 | 1.993 | 0.128 |
| Mean | Stdev |
7_O4-30_H61-7 | 1.962 | 0.184 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.968 | 0.096 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.889 | 0.120 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.969 | 0.173 |
| Mean | Stdev |
9_H41-28_O6-9 | 2.010 | 0.181 |
| Mean | Stdev |
9_N3-28_H1-9 | 1.979 | 0.098 |
| Mean | Stdev |
9_O2-28_H21-9 | 1.907 | 0.127 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.0710 | 0.7188 |
1 | H1-N3_1-36 | 2.0410 | 0.3337 |
1 | H21-O2_1-36 | 1.9559 | 0.3207 |
2 | H41-O6_2-35 | 1.9689 | 0.1558 |
2 | N3-H1_2-35 | 1.9809 | 0.0957 |
2 | O2-H21_2-35 | 1.8992 | 0.1248 |
3 | N1-H3_3-34 | 1.9623 | 0.1119 |
3 | H61-O4_3-34 | 1.9870 | 0.1700 |
4 | N1-H3_4-33 | 1.9758 | 0.1191 |
4 | H61-O4_4-33 | 1.9819 | 0.1719 |
5 | H41-O6_5-32 | 1.9964 | 0.2220 |
5 | N3-H1_5-32 | 1.9679 | 0.1175 |
5 | O2-H21_5-32 | 1.8898 | 0.1245 |
6 | O6-H41_6-31 | 1.9829 | 0.1828 |
6 | H1-N3_6-31 | 1.9828 | 0.1047 |
6 | H21-O2_6-31 | 1.8782 | 0.1161 |
7 | H3-N1_7-30 | 1.9933 | 0.1278 |
7 | O4-H61_7-30 | 1.9620 | 0.1840 |
8 | O6-H41_8-29 | 1.9694 | 0.1735 |
8 | H1-N3_8-29 | 1.9678 | 0.0961 |
8 | H21-O2_8-29 | 1.8893 | 0.1196 |
9 | H41-O6_9-28 | 2.0105 | 0.1812 |
9 | N3-H1_9-28 | 1.9792 | 0.0984 |
9 | O2-H21_9-28 | 1.9073 | 0.1270 |
10 | H3-N1_10-27 | 1.9534 | 0.1117 |
10 | O4-H61_10-27 | 2.0327 | 0.2190 |
11 | N1-H3_11-26 | 1.9964 | 0.1275 |
11 | H61-O4_11-26 | 2.0112 | 0.1957 |
12 | H3-N1_12-25 | 1.9902 | 0.1235 |
12 | O4-H61_12-25 | 1.9955 | 0.1805 |
13 | O6-H41_13-24 | 1.9621 | 0.1721 |
13 | H1-N3_13-24 | 1.9643 | 0.0972 |
13 | H21-O2_13-24 | 1.8767 | 0.1193 |
14 | O6-H41_14-23 | 1.9750 | 0.1687 |
14 | H1-N3_14-23 | 1.9851 | 0.1010 |
14 | H21-O2_14-23 | 1.9279 | 0.1435 |
15 | N1-H3_15-22 | 1.9729 | 0.1185 |
15 | H61-O4_15-22 | 2.0109 | 0.2059 |
16 | N1-H3_16-21 | 1.9472 | 0.1087 |
16 | H61-O4_16-21 | 2.0295 | 0.2062 |
17 | O6-H41_17-20 | 1.9794 | 0.1657 |
17 | H1-N3_17-20 | 1.9679 | 0.0951 |
17 | H21-O2_17-20 | 1.8941 | 0.1240 |
18 | H41-O6_18-19 | 2.0089 | 0.2304 |
18 | N3-H1_18-19 | 2.0017 | 0.1202 |
18 | O2-H21_18-19 | 1.9163 | 0.1445 |