Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
11 |
|
12 |
|
13 |
|
14 |
|
15 |
|
16 |
|
17 |
|
18 |
|
5' |
G |
- |
C |
- |
T |
- |
G |
- |
T |
- |
G |
- |
T |
- |
G |
- |
T |
- |
G |
- |
T |
- |
G |
- |
T |
- |
G |
- |
T |
- |
G |
- |
G |
- |
C |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
C |
- |
G |
- |
A |
- |
C |
- |
A |
- |
C |
- |
A |
- |
C |
- |
A |
- |
C |
- |
A |
- |
C |
- |
A |
- |
C |
- |
A |
- |
C |
- |
C |
- |
G |
5' |
|
36 |
|
35 |
|
34 |
|
33 |
|
32 |
|
31 |
|
30 |
|
29 |
|
28 |
|
27 |
|
26 |
|
25 |
|
24 |
|
23 |
|
22 |
|
21 |
|
20 |
|
19 |
|
Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 5.415 | 4.198 |
| Mean | Stdev |
1_H21-36_O2-1 | 5.505 | 4.421 |
| Mean | Stdev |
1_O6-36_H41-1 | 5.894 | 4.781 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.981 | 0.106 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.893 | 0.124 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.989 | 0.194 |
| Mean | Stdev |
11_H3-26_N1-11 | 1.979 | 0.125 |
| Mean | Stdev |
11_O4-26_H61-11 | 1.997 | 0.201 |
| Mean | Stdev |
12_H1-25_N3-12 | 1.974 | 0.098 |
| Mean | Stdev |
12_H21-25_O2-12 | 1.891 | 0.125 |
| Mean | Stdev |
12_O6-25_H41-12 | 1.983 | 0.169 |
| Mean | Stdev |
13_H3-24_N1-13 | 1.979 | 0.125 |
| Mean | Stdev |
13_O4-24_H61-13 | 1.991 | 0.194 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.980 | 0.102 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.889 | 0.122 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.979 | 0.170 |
| Mean | Stdev |
15_H3-22_N1-15 | 1.987 | 0.128 |
| Mean | Stdev |
15_O4-22_H61-15 | 1.975 | 0.184 |
| Mean | Stdev |
16_H1-21_N3-16 | 1.964 | 0.099 |
| Mean | Stdev |
16_H21-21_O2-16 | 1.882 | 0.120 |
| Mean | Stdev |
16_O6-21_H41-16 | 1.979 | 0.190 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.971 | 0.094 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.915 | 0.135 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.964 | 0.158 |
| Mean | Stdev |
18_H41-19_O6-18 | 1.988 | 0.210 |
| Mean | Stdev |
18_N3-19_H1-18 | 1.997 | 0.123 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.914 | 0.160 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.986 | 0.181 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.973 | 0.098 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.908 | 0.130 |
| Mean | Stdev |
3_H3-34_N1-3 | 1.992 | 0.377 |
| Mean | Stdev |
3_O4-34_H61-3 | 2.081 | 0.492 |
| Mean | Stdev |
4_H1-33_N3-4 | 1.981 | 0.105 |
| Mean | Stdev |
4_H21-33_O2-4 | 1.894 | 0.127 |
| Mean | Stdev |
4_O6-33_H41-4 | 1.993 | 0.191 |
| Mean | Stdev |
5_H3-32_N1-5 | 1.990 | 0.244 |
| Mean | Stdev |
5_O4-32_H61-5 | 2.009 | 0.290 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.979 | 0.102 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.891 | 0.123 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.992 | 0.179 |
| Mean | Stdev |
7_H3-30_N1-7 | 1.978 | 0.124 |
| Mean | Stdev |
7_O4-30_H61-7 | 1.995 | 0.193 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.980 | 0.105 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.889 | 0.122 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.990 | 0.193 |
| Mean | Stdev |
9_H3-28_N1-9 | 1.988 | 0.221 |
| Mean | Stdev |
9_O4-28_H61-9 | 2.007 | 0.274 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 5.8943 | 4.7809 |
1 | H1-N3_1-36 | 5.4148 | 4.1977 |
1 | H21-O2_1-36 | 5.5047 | 4.4212 |
2 | H41-O6_2-35 | 1.9858 | 0.1813 |
2 | N3-H1_2-35 | 1.9726 | 0.0980 |
2 | O2-H21_2-35 | 1.9084 | 0.1301 |
3 | H3-N1_3-34 | 1.9922 | 0.3766 |
3 | O4-H61_3-34 | 2.0814 | 0.4919 |
4 | O6-H41_4-33 | 1.9934 | 0.1905 |
4 | H1-N3_4-33 | 1.9810 | 0.1053 |
4 | H21-O2_4-33 | 1.8941 | 0.1265 |
5 | H3-N1_5-32 | 1.9902 | 0.2438 |
5 | O4-H61_5-32 | 2.0091 | 0.2901 |
6 | O6-H41_6-31 | 1.9922 | 0.1794 |
6 | H1-N3_6-31 | 1.9794 | 0.1019 |
6 | H21-O2_6-31 | 1.8913 | 0.1232 |
7 | H3-N1_7-30 | 1.9776 | 0.1238 |
7 | O4-H61_7-30 | 1.9951 | 0.1927 |
8 | O6-H41_8-29 | 1.9904 | 0.1927 |
8 | H1-N3_8-29 | 1.9801 | 0.1055 |
8 | H21-O2_8-29 | 1.8890 | 0.1217 |
9 | H3-N1_9-28 | 1.9877 | 0.2212 |
9 | O4-H61_9-28 | 2.0069 | 0.2742 |
10 | O6-H41_10-27 | 1.9891 | 0.1936 |
10 | H1-N3_10-27 | 1.9809 | 0.1063 |
10 | H21-O2_10-27 | 1.8931 | 0.1239 |
11 | H3-N1_11-26 | 1.9790 | 0.1247 |
11 | O4-H61_11-26 | 1.9971 | 0.2013 |
12 | O6-H41_12-25 | 1.9829 | 0.1693 |
12 | H1-N3_12-25 | 1.9743 | 0.0980 |
12 | H21-O2_12-25 | 1.8912 | 0.1251 |
13 | H3-N1_13-24 | 1.9786 | 0.1246 |
13 | O4-H61_13-24 | 1.9910 | 0.1939 |
14 | O6-H41_14-23 | 1.9787 | 0.1700 |
14 | H1-N3_14-23 | 1.9805 | 0.1024 |
14 | H21-O2_14-23 | 1.8895 | 0.1219 |
15 | H3-N1_15-22 | 1.9867 | 0.1283 |
15 | O4-H61_15-22 | 1.9753 | 0.1836 |
16 | O6-H41_16-21 | 1.9789 | 0.1898 |
16 | H1-N3_16-21 | 1.9644 | 0.0989 |
16 | H21-O2_16-21 | 1.8824 | 0.1204 |
17 | O6-H41_17-20 | 1.9638 | 0.1579 |
17 | H1-N3_17-20 | 1.9711 | 0.0944 |
17 | H21-O2_17-20 | 1.9151 | 0.1346 |
18 | H41-O6_18-19 | 1.9876 | 0.2104 |
18 | N3-H1_18-19 | 1.9969 | 0.1229 |
18 | O2-H21_18-19 | 1.9139 | 0.1601 |