nucleR: a package for non-parametric nucleosome positioning.
Title | nucleR: a package for non-parametric nucleosome positioning. |
Publication Type | Journal Article |
Year of Publication | 2011 |
Authors | Flores, Oscar, and Orozco Modesto |
Journal | Bioinformatics |
Volume | 27 |
Pagination | 2149-50 |
Date Published | 2011 Aug 1 |
ISSN | 1367-4811 |
Keywords | Algorithms, Fourier Analysis, Genomics, Nucleosomes, Software |
Abstract | SUMMARY: nucleR is an R/Bioconductor package for a flexible and fast recognition of nucleosome positioning from next generation sequencing and tiling arrays experiments. The software is integrated with standard high-throughput genomics R packages and allows for in situ visualization as well as to export results to common genome browser formats. AVAILABILITY: Additional information and methodological details can be found at https://mmb.pcb.ub.es/nucleR |
DOI | 10.1093/bioinformatics/btr345 |