nucleR: non-parametric nucleosome positioning

nucleR is a R/Bioconductor package for working with tiling arrays and next generation sequencing. It uses a novel aproach in this field which comprises a deep profile cleaning using Fourier Transform and peak scoring for a quick and flexible nucleosome calling.

More information is available in the associated article[1] and library can be downloaded from Bioconductor.


  1. nucleR: a package for non-parametric nucleosome positioning.,
    Flores, Oscar, and Orozco Modesto
    , Bioinformatics, 2011 Aug 1, Volume 27, p.2149-50, (2011)